LlonJ1.1

The LlonJ1.1 geneset contains an update for the ncRNAs using the current Ensembl Genomes pipeline. No modifications of protein-coding loci were undertaken.

Note that this is a TEMPORARY gene set, and it won't be archived. We are not planning on maintaining identifiers and recommend using locations as well as identifiers to identify genes.

Genes

Genes Protein-coding Other
10,429 10,110 319

Transcripts

Transcripts Protein-coding Other
10,429 10,110 319
Release date: 
25 Feb 2014

FAQ: More details on what these counts mean.

Assembly: 

LlonJ1

Three types of WGS libraries were used to produce these Lutzomyia longipalpis sequencing data: a 454 Titanium fragment library and paired end libraries with 3 kb and 8 kb inserts. The 454 data (11.5 million reads; ~24.4x coverage) was derived from the same individual while mate pair reads (7.4 million 3kb reads, 9.6X; 3.7 million 8kb reads, 4.9X) were derived from a pool of individuals. In total about 22.6 million reads were generating representing 38.9x coverage of this sand fly genome.