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Datasets

Nucleotide

Chromosomes LVP_AGWG strain genomic chromosomes sequences, AaegL5 assembly, softmasked using RepeatMasker, Dust, and TRF.

Contigs Aag2 cell line strain genomic contigs sequences, Aag2 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds Aag2 cell line strain genomic scaffolds sequences, Aag2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Scaffolds LVP_AGWG strain genomic scaffolds sequences, AaegL5 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts LVP_AGWG strain transcript sequences, AaegL5.2 geneset.

Peptide

Peptides LVP_AGWG strain peptide sequences, AaegL5.2 geneset.

Nucleotide

Assembled transcriptome TSA:GAPW00000000.1 from reproductive organs

Contigs Foshan strain genomic contigs sequences, AaloF1 assembly.

Contigs C6/36 cell line strain genomic contigs sequences, GCA_001876365.2 assembly.

Scaffolds Foshan strain genomic scaffolds sequences, AaloF1 assembly (not repeat-masked).

Scaffolds C6/36 cell line strain genomic scaffolds sequences, GCA_001876365.2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Foshan strain transcript sequences, AaloF1.2 geneset.

Transcripts C6/36 cell line strain transcript sequences, NCBI-101 geneset.

Peptide

Peptides Foshan strain peptide sequences, AaloF1.2 geneset.

Peptides C6/36 cell line strain peptide sequences, NCBI-101 geneset.

Nucleotide

Assembled transcriptome 16699 assembled transcript sequences from combined RNAseq and EST sequencing generated by Martínez-Barnetche et al. (2012)

Assembled transcriptome 31295 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Chromosomes STECLA strain genomic chromosomes sequences, AalbS2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Scaffolds STECLA strain genomic scaffolds sequences, AalbS2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts STECLA strain transcript sequences, AalbS2.6 geneset.

Peptide

Peptides STECLA strain peptide sequences, AalbS2.6 geneset.

Nucleotide

Assembled transcriptome TSA:GAMD00000000.1 from L3, L4 larvae and adult females.

Peptide

Assembled proteome TSA:GAMD00000000.1 from L3, L4 larvae and adult females, peptide sequences.

Nucleotide

Assembled transcriptome 72049 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Contigs Dongola strain genomic contig sequences, AaraD1 assembly.

Scaffolds Dongola strain genomic scaffold sequences, AaraD1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Dongola strain transcript sequences, AaraD1.11 geneset.

Peptide

Peptides Dongola strain peptide sequences, AaraD1.11 geneset.

Nucleotide

Chromosomes EBRO strain genomic chromosomes sequences, AatrE3 assembly, softmasked using RepeatMasker, Dust, and TRF.

Scaffolds EBRO strain genomic scaffolds sequences, AatrE3 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts EBRO strain transcript sequences, AatrE3.1 geneset.

Peptide

Peptides EBRO strain peptide sequences, AatrE3.1 geneset.

Nucleotide

Contigs ACHKN1017 strain genomic contig sequences, AchrA1 assembly.

Scaffolds ACHKN1017 strain genomic scaffold sequences, AchrA1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts ACHKN1017 strain transcript sequences, AchrA1.7 geneset.

Peptide

Peptides ACHKN1017 strain peptide sequences, AchrA1.7 geneset.

Nucleotide

Chromosomes Ngousso strain genomic chromosomes sequences, AcolN1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Contigs Mali-NIH strain genomic contigs sequences, AcolM1 assembly.

Scaffolds Mali-NIH strain genomic scaffold sequences, AcolM1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Scaffolds Ngousso strain genomic scaffolds sequences, AcolN1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Mali-NIH strain transcript sequences, AcolM1.8 geneset.

Transcripts Ngousso strain transcript sequences, AcolN1.0 geneset.

Peptide

Peptides Mali-NIH strain peptide sequences, AcolM1.8 geneset.

Peptides Ngousso strain peptide sequences, AcolN1.0 geneset.

Nucleotide

Contigs A-37 strain genome contig sequences, AculA1 assembly.

Scaffolds A-37 strain genome scaffold sequences, AculA1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts A-37 strain transcript sequences, AculA1.6 geneset.

Peptide

Peptides A-37 strain peptide sequences, AculA1.6 geneset.

Nucleotide

Contigs Coari strain genomic contig sequences, AdarC3 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds Coari strain genomic scaffold sequences, AdarC3 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Coari strain transcript sequences, AdarC3.8 geneset.

Peptide

Peptides Coari strain peptide sequences, AdarC3.8 geneset.

Nucleotide

Assembled transcriptome 41061 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Contigs WRAIR2 strain genomic contig sequences, AdirW1 assembly.

Scaffolds WRAIR2 strain genomic scaffold sequences, AdirW1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts WRAIR2 strain transcript sequences, AdirW1.8 geneset.

Peptide

Peptides WRAIR2 strain peptide sequences, AdirW1.8 geneset.

Nucleotide

Contigs Epiroticus2 strain genomic contig sequences, AepiE1 assembly.

Scaffolds Epiroticus2 strain genomic scaffold sequences, AepiE1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Epiroticus2 strain transcript sequences, AepiE1.7 geneset.

Peptide

Peptides Epiroticus2 strain peptide sequences, AepiE1.7 geneset.

Nucleotide

Assembled transcriptome 45708 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Contigs FAR1 strain genomic contig sequences, AfarF2 assembly.

Scaffolds FAR1 strain genomic scaffold sequences, AfarF2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts FAR1 strain transcript sequences, AfarF2.6 geneset.

Peptide

Peptides FAR1 strain peptide sequences, AfarF2.6 geneset.

Nucleotide

Assembled transcriptome 74948 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Nucleotide

Assembled transcriptome 15527 assembled RNAseq transcripts generated by Crawford et al. (2010)

Chromosomes FUMOZ strain genomic chromosomes sequences, AfunF3 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts FUMOZ strain transcript sequences, AfunF3.1 geneset.

Peptide

Peptides FUMOZ strain peptide sequences, AfunF3.1 geneset.

Nucleotide

Chromosomes PEST strain chromosome arm sequences, AgamP4 assembly, softmasked using RepeatMasker, Dust, and TRF.

Contigs Pimperena strain genomic contigs sequences, AgamS1 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds PEST strain genomic scaffold sequences, AgamP4 assembly, softmasked using RepeatMasker, Dust, and TRF.

Scaffolds Pimperena strain genomic scaffolds sequences, AgamS1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts PEST strain transcript sequences, AgamP4.12 geneset.

Peptide

Peptides PEST strain peptide sequences, AgamP4.12 geneset.

Nucleotide

Contigs maculatus3 strain genomic contigs sequences, AmacM1 assembly.

Scaffolds maculatus3 strain genomic scaffolds sequences, AmacM1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts maculatus3 strain transcript sequences, AmacM1.5 geneset.

Peptide

Peptides maculatus3 strain peptide sequences, AmacM1.5 geneset.

Nucleotide

Contigs CM1001059_A strain genomic contigs sequences, AmelC2 assembly.

Scaffolds CM1001059_A strain genomic scaffolds sequences, AmelC2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts CM1001059_A strain transcript sequences, AmelC2.6 geneset.

Peptide

Peptides CM1001059_A strain peptide sequences, AmelC2.6 geneset.

Nucleotide

Contigs MAF strain genomic contig sequences, AmerM2 assembly.

Scaffolds MAF strain genomic scaffold sequences, AmerM2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts MAF strain transcript sequences, AmerM2.9 geneset.

Peptide

Peptides MAF strain peptide sequences, AmerM2.9 geneset.

Nucleotide

Contigs MINIMUS1 strain genomic contig sequences, AminM1 assembly.

Scaffolds MINIMUS1 strain genomic scaffold sequences, AminM1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts MINIMUS1 strain transcript sequences, AminM1.8 geneset.

Peptide

Peptides MINIMUS1 strain peptide sequences, AminM1.8 geneset.

Nucleotide

Contigs Dinderesso isolate genome contig sequences, ATLZ01 assembly.

Nucleotide

Contigs APwgs2 isolate genome contig sequences, JXXA01 assembly.

Nucleotide

Assembled transcriptome 46058 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Contigs SANGWE strain genomic contig sequences, AquaS1 assembly.

Scaffolds SANGWE strain genomic scaffold sequences, AquaS1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts SANGWE strain transcript sequences, AquaS1.11 geneset.

Peptide

Peptides SANGWE strain peptide sequences, AquaS1.11 geneset.

Nucleotide

Assembled transcriptome 82132 assembled RNAseq transcripts generated by Hittinger et al. (2010).

Assembled transcriptome TSA:GBTE01000000.1 from multiple developmental stages.

Nucleotide

Contigs SINENSIS strain genomic contig sequences, AsinS2 assembly.

Contigs China strain genomic contig sequences, AsinC2 assembly.

Scaffolds SINENSIS strain genomic scaffold sequences, AsinS2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Scaffolds China strain genomic scaffolds sequences, AsinC2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts China strain transcript sequences, AsinC2.2 geneset.

Transcripts SINENSIS strain transcript sequences, AsinS2.5 geneset.

Peptide

Peptides SINENSIS strain peptide sequences, AsinS2.5 geneset.

Peptides China strain peptide sequences, AsinC2.2 geneset.

Nucleotide

Contigs BB02 strain genomic contig sequences, BglaB1 assembly.

Scaffolds BB02 strain genomic scaffold sequences, BglaB1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts BB02 strain transcript sequences, BglaB1.6 geneset.

Peptide

Peptides BB02 strain peptide sequences, BglaB1.6 geneset.

Nucleotide

Contigs Harlan strain genome contig sequences, ClecH1 assembly.

Scaffolds Harlan strain genome scaffold sequences, ClecH1 assembly.

Transcripts Harlan strain transcript sequences, ClecH1.3 geneset.

Peptide

Peptides Harlan strain peptide sequences, ClecH1.3 geneset.

Nucleotide

Contigs Johannesburg strain genomic contig sequences, CpipJ2 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds Johannesburg strain genomic scaffolds, CpipJ2 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Johannesburg strain transcript sequences, CpipJ2.4 geneset.

Peptide

Peptides Johannesburg strain peptide sequences, CpipJ2.4 geneset.

Nucleotide

Contigs TTRI strain genomic contig sequences, GausT1 assembly.

Scaffolds TTRI strain genomic scaffold sequences, GausT1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts TTRI strain transcript sequences, GausT1.7 geneset.

Peptide

Peptides TTRI strain peptide sequences, GausT1.7 geneset.

Nucleotide

Contigs IAEA strain genomic contig sequences, GbreI1 assembly.

Scaffolds IAEA strain genomic scaffold sequences, GbreI1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts IAEA strain transcript sequences, GbreI1.7 geneset.

Peptide

Peptides IAEA strain peptide sequences, GbreI1.7 geneset.

Nucleotide

Contigs IAEA strain genomic contig sequences, GfusI1 assembly.

Scaffolds IAEA strain genomic scaffold sequences, GfusI1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts IAEA strain transcript sequences, GfusI1.7 geneset.

Peptide

Peptides IAEA strain peptide sequences, GfusI1.7 geneset.

Nucleotide

Contigs Yale strain genomic contig sequenes, GmorY1 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds Yale strain genomic scaffold sequences, GmorY1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Yale strain transcript sequences, GmorY1.9 geneset.

Peptide

Peptides Yale strain peptide sequences, GmorY1.9 geneset.

Nucleotide

Contigs IAEA strain genomic contig sequences, GpalI1 assembly.

Scaffolds IAEA strain genomic scaffold sequences, GpalI1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts IAEA strain transcript sequences, GpalI1.7 geneset.

Peptide

Peptides IAEA strain peptide sequences, GpalI1.7 geneset.

Nucleotide

Contigs IAEA strain genomic contigs sequences, GpapI1 assembly.

Scaffolds IAEA strain genomic scaffold sequences, GpapI1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts IAEA strain transcript sequences, GpapI1.4 geneset.

Peptide

Peptides IAEA strain peptide sequences, GpapI1.4 geneset.

Nucleotide

Assembled transcriptome TSA:GANP00000000.1 from midgut and salivary glands

Assembled transcriptome TSA:GADI00000000.1 from salivary glands

Assembled transcriptome TSA:GBIH00000000.1 from hemocytes, midgut and salivary glands

Assembled transcriptome TSA:GCJO00000000.1 from adult female midgut

Contigs Charles River isolate genome contig sequences, JXMZ01 assembly.

Nucleotide

Contigs UoL-UT strain genomic contigs sequences, LdelU1 assembly.

Scaffolds UoL-UT strain genomic scaffolds sequences, LdelU1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts UoL-UT strain transcript sequences, LdelU1.1 geneset.

Peptide

Peptides UoL-UT strain peptide sequences, LdelU1.1 geneset.

Nucleotide

Contigs Jacobina strain genomic contig sequences, LlonJ1 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds Jacobina strain genomic scaffold sequences, LlonJ1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Jacobina strain transcript sequences, LlonJ1.5 geneset.

Peptide

Peptides Jacobina strain peptide sequences, LlonJ1.5 geneset.

Nucleotide

Assembled transcriptome TSA:GDAV00000000.1 pooled male and female larvae, pupae and adults.

Contigs Aabys strain genomic contig sequences, MdomA1 assembly.

Scaffolds Aabys strain genomic scaffold sequences, MdomA1 assembly, softmasked using WindowMasker, Dust, and TRF.

Transcripts aabys strain transcript sequences, MdomA1.3 geneset.

Peptide

Peptides aabys strain peptide sequences, MdomA1.3 geneset.

Nucleotide

Contigs USDA strain genomic contig sequences, PhumU2 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds USDA strain genomic scaffold sequences, PhumU2 assembly, softmasked using Dust and TRF.

Transcripts USDA strain transcript sequences, PhumU2.4 geneset.

Peptide

Peptides USDA strain peptide sequences, PhumU2.4 geneset.

Nucleotide

Contigs Israel strain genomic contigs sequences, PpapI1 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds Israel strain genomic scaffold sequences, PpapI1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Israel strain transcript sequences, PpapI1.5 geneset.

Peptide

Peptides Israel strain peptide sequences, PpapI1.5 geneset.

Nucleotide

Contigs Deutsch isolate genome contig sequences, ADMZ02 assembly.

Nucleotide

Assembled transcriptome TSA:GAHY00000000.1 from digestive tract

Contigs CDC strain genomic contig sequences, RproC3 assembly.

ESTs Publicly submitted EST/cDNAs as of December 2012 with ends trimmed for poly A|T sequences.

Scaffolds CDC strain genomic scaffold sequences, RproC3 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts CDC strain transcript sequences, RproC3.3 geneset.

Peptide

Peptides CDC strain peptide sequences, RproC3.3 geneset.

Nucleotide

Contigs Arlian strain genomic contigs sequences, SscaA1 assembly.

Scaffolds Arlian strain genomic scaffolds sequences, SscaA1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts Arlian strain transcript sequences, SscaA1.2 geneset.

Peptide

Peptides Arlian strain peptide sequences, SscaA1.2 geneset.

Nucleotide

Assembled transcriptome TSA:GDIM00000000.1 pooled male and female whole animals

Contigs USDA strain genome contig sequences, ScalU1 assembly.

Scaffolds USDA strain genomic scaffolds sequences, ScalU1 assembly, softmasked using RepeatMasker, Dust, and TRF.

Transcripts USDA strain transcript sequences, ScalU1.5 geneset.

Peptide

Peptides USDA strain peptide sequences, ScalU1.5 geneset.

Nucleotide

Assembled transcriptome TSA:GBBI00000000.1 from salivary glands