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A. aegypti
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FASTA Query Sequence
>Example Sequence CGGTCTATTTGGGGATCGAACCCATGACGAGCATGATGTTAAGTCGTA
Program
blastn
tblastn
tblastx
blastp
blastx
blastn - Nucleotide vs. Nucleotide
Datasets
Anopheles gambiae
Aedes aegypti
Ixodes scapularis
Culex quinquefasciatus
Pediculus humanus
Other Organisms
ESTs
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Click on an organism to view its databases
Nucleotide
Assembly
AgamP3, Chromosome Arms - PEST Strain
Transcripts
AgamP3.5 Gene Build
ESTs
September 2009 GenBank
Contigs
Mali-NIH Strain / M-Form, November 2009
Contigs
Pimperena Strain / S-Form, November 2009
Scaffolds
Mali-NIH Strain / M-Form, November 2009
Scaffolds
Pimperena Strain / S-Form, November 2009
Trace Reads
PEST Strain, September 2009
Trace Reads
Mali-NIH Strain / M-Form, September 2009
Trace Reads
Pimperena Strain / S-Form, September 2009
Peptide
Proteins
AgamP3.5 Gene Build
Nucleotide
Assembly
AaegL1, Supercontigs - Liverpool Strain
Transcripts
AaegL1.2 Gene Build
ESTs
September 2009 GenBank
Trace Reads
Liverpool Strain, September 2009
Peptide
Proteins
AaegL1.2 Gene Build
Nucleotide
Assembly
IscalW1, Supercontigs - WIKEL Strain
Transcripts
IscaW1.1 Gene Build
ESTs
September 2009 GenBank
Trace Reads
WIKEL Strain, September 2009
Peptide
Proteins
IscaW1.1 Gene Build
Nucleotide
Assembly
CpipJ1, Supercontigs - Johannesburg Strain
Transcripts
CpipJ1.2 Gene Build
ESTs
September 2009 GenBank
Trace Reads
Johannesburg Strain, September 2009
Peptide
Proteins
CpipJ1.2 Gene build
Nucleotide
Assembly
PhumU1, Supercontigs - USDA Strain
Transcripts
PhumU1.2 Gene Build
ESTs
September 2009 GenBank
Trace Reads
USDA Strain, September 2009
Peptide
Proteins
PhumU1.2 Gene Build
Nucleotide
ESTs
Glossina morsitans
- publicly available, September 2009
Lutzomia longipalpis
- publicly available, September 2009
Phlebotomus papatasi
- publicly available, September 2009
Rhodnius prolixus
- publicly available, September 2009
Trace Reads
Glossina morsitans
- publicly available, September 2009
Lutzomia longipalpis
- publicly available, September 2009
Phlebotomus papatasi
- publicly available, September 2009
Rhodnius prolixus
- publicly available, September 2009
Nucleotide
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Individual Libraries
Search individual EST libraries from all species (One database per library)
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Word Size
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Scoring Matrix
BLOSUM45
BLOSUM62
BLOSUM80
PAM30
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Complexity Masking
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Number of Results
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Job Control
VectorBase Last Updated February 03rd, 2010
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